Welcome to SCRIP’s documentation!

SCRIP (Single Cell Regulatory network Inference using ChIP-seq & motif) is a toolkit for elucidating the gene regulation pattern based on scATAC-seq leveraing a huge amount of bulk ChIP-seq data. It supports (1) evaluating the TR activities in single-cell based on the integration of the scATAC-seq dataset and curated reference; (2) determining the target genes of TR at single-cell resolution; (3) constructing the GRN in single-cell and identifying cell-specific regulation.